A new electron injection and detection system for studying excess electron transfer in DNA

ORGN 766

Libin Xu, lxu6@uic.edu, Martin Newcomb, men@uic.edu, Mukul Lal, mukul.lal@gvkbio.com, and Jing Jin, jjin2@uic.edu. Department of Chemistry, University of Illinois at Chicago, Room 4500, 845 W. Taylor St., Chicago, IL 60607
A new and efficient electron injection and electron trapping system was designed and synthesized for the studies of the kinetics of excess electron transfer (EET) through DNA. Photolysis of α-hydroxy phenyl ketones by 355 nm laser under neutral or basic conditions gave ketyl radicals and ketyl radical anions respectively, which were used as the single-electron injectors to reduce the DNA bases. For detection, 5- and 6-diphenylcyclopropyl uracils were synthesized to trap their radical anions upon reduction by fast ring opening to give diphenylalkyl radical that absorbs stongly at 335 nm. Our experiments showed that only 6-diphenylcyclopropyl uracil can trap its radical anion. Kinetics was monitored at 335 nm for the intramolecular EET from ketyl radical anion to uracil, which gave k = 1.4×10^6 s^(-1) over a calculated distance about 9.5 Å. This rate constant was compared with intramolecular EET to other electron acceptors, such as 9-fluorenone and alkyl ketone.