Synthesis and conformational analysis of ß-amino acid-derived small cyclic peptides

ORGN 432

B. M. Rajesh, rajeshbm@rediffmail.com1, S. Kiran Kumar, kumarskiran@yahoo.com2, Ajit Chand Kunwar, kunwar@iict.res.in2, and Javed Iqbal, javediqbaldrf@hotmail.com3. (1) Discovery Chemistry, Discovery Research, Dr. Reddy's Laboratories Ltd, Bollaram road, Miyapur, Hyderabad-500 049, India, (2) NMR Center, Indian Institute of Chemical Technology, Taranaka, Hyderabad, India, (3) Discovery Chemistry, Discovery Research, Dr. Reddy's Laboratories, Ltd, Bollaram road, Miyapur, Hyderabad, 500049, India
HIV protease specifically cleaves the imide bond between phenylalanine and proline. So the design of a molecule, mimicking the stereo electronic environment of this scissile bond may lead to potent inhibitors. While, unnatural amino acids, mainly Beta-amino acids, are known to invoke a turn structure in small peptides. Beta-amino acids have also been successfully used in creating peptidomimetics that not only have potent biological activity, but also are resistant to proteolysis. We have undertaken the synthesis of acyclic peptides based on homophenylglycine (Beta-Phg)-L-Proline that have been transformed into cyclic peptides by ring closing metathesis (RCM) reaction. These cyclizations result into the concomitant formation of unnatural linker amino acids, 6-amino hexanoic acid (Aha), 6-hydroxy hexanoic acid and Gamma-amino butanoic acid (GABA). The detailed synthesis and influence of the linker on conformational properties of such cyclic peptides will be discussed.